USC-OGP 2-DE database Two-dimensional polyacrylamide gel electrophoresis database

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Searching in 'USC-OGP 2-DE database' for entry matching: CBX3_HUMAN USC-OGP 2-DE database:  CBX3_HUMAN CBX3_HUMAN General information about the entry View entry in simple text format Entry name CBX3_HUMAN Primary accession number Q13185 integrated into USC-OGP 2-DE database on  January 17, 2017 (release 1) 2D Annotations were last modified on January 17, 2017 (version 1) General Annotations were last modified on  April 5, 2017 (version 2) Name and origin of the protein Description RecName: Full=Chromobox protein homolog 3; AltName: Full=HECH; AltName: Full=Heterochromatin protein 1 homolog gamma; Short=HP1 gamma; AltName: Full=Modifier 2 protein;. Gene name Name=CBX3 Annotated species Homo sapiens (Human) [TaxID: 9606] Taxonomy Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. References [1]   2D GEL CHARACTERIZATION Author 1., Author 2. Submitted (Mar-2011) to Current 2D PAGE maps for identified proteins How to interpret a protein UVEAL_MELANOMA_3-10 {UVEAL MELANOMA 3-10} Homo sapiens (Human)   map experimental info   UVEAL_MELANOMA_3-10 MAP LOCATIONS: SPOT OGP-1306: pI=5.02; Mw=22379 Cross-references UniProtKB/Swiss-Prot Q13185; CBX3_HUMAN. 2D PAGE maps for identified proteins How to interpret a protein map You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw. Warning 1: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly. Warning 2: the 2D PAGE map is built on demand. This may take some few seconds to be computed. External data extracted from UniProtKB/Swiss-Prot Extracted from UniProtKB/Swiss-Prot, release: 0.0 Entry name CBX3_HUMAN Primary accession number Q13185 Secondary accession number(s) Q96CD7 Q99409 Q9BVS3 Q9P0Z6 Sequence was last modified on  October 17, 2006 (version 4) Annotations were last modified on  March 15, 2017 (version 183) Name and origin of the protein Description RecName: Full=Chromobox protein homolog 3; AltName: Full=HECH; AltName: Full=Heterochromatin protein 1 homolog gamma; Short=HP1 gamma; AltName: Full=Modifier 2 protein; Gene name Name=CBX3 Encoded on Name=CBX3 Keywords 3D-structure; Acetylation; Biological rhythms; Chromatin regulator; Complete proteome; Direct protein sequencing; Isopeptide bond; Nucleus; Phosphoprotein; Reference proteome; Repeat; Repressor; Transcription; Transcription regulation; Ubl conjugation. Copyright Copyrighted by the UniProt Consortium, see http://www.uniprot.org/help/license. Distributed under the Creative Commons Attribution-NoDerivs License Cross-references EMBL U26312; AAB48101.1; -; mRNA EMBL AB030905; BAA83340.1; -; mRNA EMBL AF136630; AAF62370.1; -; mRNA EMBL BC000954; AAH00954.1; -; mRNA EMBL BC014380; AAH14380.1; -; mRNA CCDS CCDS5398.1; -; . RefSeq NP_009207.2; NM_007276.4; . RefSeq NP_057671.2; NM_016587.3; . RefSeq XP_005249668.1; XM_005249611.3; . UniGene Hs.381189; -; . PDB 2L11; NMR; -; A=29-81 PDB 3DM1; X-ray; 2.40 A; A/C/E/G=29-86 PDB 3KUP; X-ray; 1.77 A; A/B/C/D=110-173 PDB 3TZD; X-ray; 1.81 A; A=29-81 PDB 5T1I; X-ray; 1.60 A; A/B=110-176 PDBsum 2L11; -; . PDBsum 3DM1; -; . PDBsum 3KUP; -; . PDBsum 3TZD; -; . PDBsum 5T1I; -; . ProteinModelPortal Q13185; -; . SMR Q13185; -; . BioGrid 116463; 108; . DIP DIP-5985N; -; . IntAct Q13185; 108; . MINT MINT-5002782; -; . STRING 9606.ENSP00000336687; -; . iPTMnet Q13185; -; . PhosphoSitePlus Q13185; -; . SwissPalm Q13185; -; . BioMuta CBX3; -; . DMDM 116241284; -; . SWISS-2DPAGE Q13185; -; . EPD Q13185; -; . MaxQB Q13185; -; . PaxDb Q13185; -; . PeptideAtlas Q13185; -; . PRIDE Q13185; -; . TopDownProteomics Q13185; -; . DNASU 11335; -; . Ensembl ENST00000337620; ENSP00000336687; ENSG00000122565; . Ensembl ENST00000396386; ENSP00000379670; ENSG00000122565; . GeneID 11335; -; . KEGG hsa:11335; -; . UCSC uc003sxt.4; human; . CTD 11335; -; . DisGeNET 11335; -; . GeneCards CBX3; -; . HGNC HGNC:1553; CBX3; . HPA CAB001973; -; . HPA HPA004902; -; . MIM 604477; gene; . neXtProt NX_Q13185; -; . OpenTargets ENSG00000122565; -; . PharmGKB PA26128; -; . eggNOG KOG1911; Eukaryota; . eggNOG ENOG4111JKD; LUCA; . GeneTree ENSGT00510000046310; -; . HOGENOM HOG000220852; -; . HOVERGEN HBG000400; -; . InParanoid Q13185; -; . KO K11586; -; . OMA RESADKP; -; . OrthoDB EOG091G0RBS; -; . PhylomeDB Q13185; -; . TreeFam TF350503; -; . Reactome R-HSA-427389; ERCC6 (CSB) and EHMT2 (G9a) positively regulate rRNA expression; . Reactome R-HSA-73777; RNA Polymerase I Chain Elongation; . SIGNOR Q13185; -; . ChiTaRS CBX3; human; . EvolutionaryTrace Q13185; -; . GeneWiki CBX3; -; . GenomeRNAi 11335; -; . PRO PR:Q13185; -; . Proteomes UP000005640; Chromosome 7; . Bgee ENSG00000122565; -; . CleanEx HS_CBX3; -; . ExpressionAtlas Q13185; baseline and differential; . Genevisible Q13185; HS; . GO GO:0000785; C:chromatin; IDA:UniProtKB; . GO GO:0000775; C:chromosome; centromeric region; IDA:CACAO GO GO:0000779; C:condensed chromosome; centromeric region; ISS:UniProtKB GO GO:0000784; C:nuclear chromosome; telomeric region; IDA:BHF-UCL GO GO:0005635; C:nuclear envelope; ISS:UniProtKB; . GO GO:0005719; C:nuclear euchromatin; IDA:UniProtKB; . GO GO:0005720; C:nuclear heterochromatin; IDA:UniProtKB; . GO GO:0005637; C:nuclear inner membrane; NAS:UniProtKB; . GO GO:0031618; C:nuclear pericentric heterochromatin; ISS:UniProtKB; . GO GO:0005634; C:nucleus; IDA:UniProtKB; . GO GO:0035985; C:senescence-associated heterochromatin focus; IEA:Ensembl; . GO GO:0005819; C:spindle; IDA:UniProtKB; . GO GO:0019899; F:enzyme binding; IPI:UniProtKB; . GO GO:1990226; F:histone methyltransferase binding; IPI:BHF-UCL; . GO GO:0042802; F:identical protein binding; IPI:IntAct; . GO GO:0019904; F:protein domain specific binding; IPI:UniProtKB; . GO GO:0071549; P:cellular response to dexamethasone stimulus; IEA:Ensembl; . GO GO:0006338; P:chromatin remodeling; NAS:UniProtKB; . GO GO:0016569; P:covalent chromatin modification; IEA:UniProtKB-KW; . GO GO:0045892; P:negative regulation of transcription; DNA-templated; IDA:UniProtKB GO GO:0048511; P:rhythmic process; IEA:UniProtKB-KW; . GO GO:0006351; P:transcription; DNA-templated; IEA:UniProtKB-KW InterPro IPR000953; Chromo/chromo_shadow_dom; . InterPro IPR017984; Chromo_dom_subgr; . InterPro IPR023780; Chromo_domain; . InterPro IPR008251; Chromo_shadow_dom; . InterPro IPR016197; Chromodomain-like; . InterPro IPR023779; Chromodomain_CS; . Pfam PF00385; Chromo; 1; . Pfam PF01393; Chromo_shadow; 1; . PRINTS PR00504; CHROMODOMAIN; . SMART SM00298; CHROMO; 2; . SMART SM00300; ChSh; 1; . SUPFAM SSF54160; SSF54160; 2; . PROSITE PS00598; CHROMO_1; 1; . PROSITE PS50013; CHROMO_2; 2; .

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